Education
In Progress |
M.Sc. Computer Science |
2011 |
B.Sc. Online Media cum laude Thesis: The use of Apache Mahout and the MapReduce paradigm to perform cluster analysis of big data on Amazon Web Services |
Research Experience
May 2015 to |
Scholar at Department of Epidemiology and Biostatistics, Michigan State University |
Mar 2011 to |
Visiting Scientist at Department of Pathology, Division of Informatics, University of Alabama at Birmingham |
Mar 2009 to |
Student Research Assistant at Research Center for Intelligent Media |
Journal Publications
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B. D. Valente, G. de los Campos, A. Grueneberg, C.-Y. Chen, R. Ros-Freixedes, and W. O. Herring, “Using Residual Regressions to Quantify and Map Signal Leakage in Genomic Prediction,” Genetics Selection Evolution, vol. 55, no. 1, p. 57, Aug. 2023, doi: 10.1186/s12711-023-00830-1.
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G. de los Campos, A. Grueneberg, S. Funkhouser, P. Pérez-Rodríguez, and A. Samaddar, “Fine Mapping and Accurate Prediction of Complex Traits Using Bayesian Variable Selection Models Applied to Biobank-Size Data,” European Journal of Human Genetics, Jul. 2022, doi: 10.1038/s41431-022-01135-5.
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A. Gonzalez-Reymundez, A. Grueneberg, G. Lu, F. C. Alves, G. Rincon, and A. I. Vazquez, “MOSS: Multi-Omic Integration with Sparse Value Decomposition,” Bioinformatics, vol. 38, no. 10, pp. 2956–2958, May 2022, doi: 10.1093/bioinformatics/btac179.
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A. Grueneberg and G. de los Campos, “BGData - A Suite of R Packages for Genomic Analysis with Big Data,” G3: Genes, Genomes, Genetics, vol. 9, no. 5, pp. 1377–1383, May 2019, doi: 10.1534/g3.119.400018.
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M. Behring et al., “Integrated Landscape of Copy Number Variation and RNA Expression Associated with Nodal Metastasis in Invasive Ductal Breast Carcinoma,” Oncotarget, vol. 9, no. 96, pp. 36836–36848, Dec. 2018, doi: 10.18632/oncotarget.26386.
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H. Kim, A. Grueneberg, A. I. Vazquez, S. Hsu, and G. de los Campos, “Will Big Data Close the Missing Heritability Gap?,” Genetics, vol. 207, no. 3, pp. 1135–1145, Nov. 2017, doi: 10.1534/genetics.117.300271.
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H. Koo, J. A. Hakim, P. R. E. Fisher, A. Grueneberg, D. T. Andersen, and A. K. Bej, “Distribution of Cold Adaptation Proteins in Microbial Mats in Lake Joyce, Antarctica: Analysis of Metagenomic Data by Using Two Bioinformatics Tools,” Journal of microbiological methods, vol. 120, pp. 23–28, 2016.
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M. D. Cain, J. R. Siebert, E. Iriabho, A. Gruneberg, J. S. Almeida, and O. M. Faye-Petersen, “Development of Novel Software to Generate Anthropometric Norms at Perinatal Autopsy,” Pediatric and Developmental Pathology, vol. 18, no. 3, pp. 203–209, 2015.
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D. E. Robbins, A. Grüneberg, H. F. Deus, M. M. Tanik, and J. S. Almeida, “A Self-Updating Road Map of The Cancer Genome Atlas,” Bioinformatics, vol. 29, no. 10, pp. 1333–1340, 2013.
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J. S. Almeida et al., “ImageJS: Personalized, Participated, Pervasive, and Reproducible Image Bioinformatics in the Web Browser,” Journal of pathology informatics, vol. 3, 2012.
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J. S. Almeida, A. Grüneberg, W. Maass, and S. Vinga, “Fractal MapReduce Decomposition of Sequence Alignment,” Algorithms for Molecular Biology, vol. 7, no. 1, p. 12, 2012.
Conference Proceedings
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D. E. Robbins, A. Grüneberg, H. F. Deus, M. M. Tanik, and J. Almeida, “TCGA Toolbox: An Open Web App Framework for Distributing Big Data Analysis Pipelines for Cancer Genomics,” in Proceedings of the International Conference on Bioinformatics, Computational Biology and Biomedical Informatics, 2013, p. 62.
Poster Presentations
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A. Grueneberg and J. Almeida, “A Minimal Governance Layer for the Web of Linked Data,” at CSHALS, Boston, MA, Feb. 2014.
Professional Experience
Jun 2004 to |
Web Developer at trenovis OHG |
Teaching Experience
Sep 2016 to Oct 2016 |
R Programming: Essentials and Basics |
Open Source Experience
2013 to 2019 |
AnkiDroid, a spaced repetition flashcard app for Android with over a million users |
2014 to 2015 |
Code for Birmingham, a Code for America brigade |
Internships
Sep 2008 to |
Intern at CAS Software AG |
Certifications
2010 |
Basics of Municipal Broadband Networks |
Other
Citizenship |
Germany |
Languages |
German (native), English (fluent), French (proficient), Korean (basic), Japanese (basic) |